The most obvious answer would be not enough room. Even the smaller bar which is probably the IFF is only integrated into the mast in the rear quadrant, with the other three being placed on top of the bridge.
The alleged antennas do not seem to take up much room. It seems improbable that the design for so large a ship could be so tight that room could not be made for them in the original superstructure/mast design if they had been part of the ship's core equipment from early stage of the design.
I think the way they are mounted suggests:
1. They were a late stage addition to the ship's design, added after the superstructure and mast designs were already completed, possibly after fabrication of these parts had already begun.
2. They are not considered truly vital to the ship's most important mission, otherwise the ship would be delayed to allow design revisions required to properly integrate them.
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